Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | Set_02_BT_ATM_minus_versus_ATM_plus.phenotype_BT_ATM_minus_versus_ATM_plus.cls #BT_ATM_minus_versus_ATM_plus.phenotype_BT_ATM_minus_versus_ATM_plus.cls #BT_ATM_minus_versus_ATM_plus_repos |
| Phenotype | phenotype_BT_ATM_minus_versus_ATM_plus.cls#BT_ATM_minus_versus_ATM_plus_repos |
| Upregulated in class | ATM_plus |
| GeneSet | BIOCARTA_NF-KB SIGNALING PATHWAY |
| Enrichment Score (ES) | -0.6349082 |
| Normalized Enrichment Score (NES) | -1.7834543 |
| Nominal p-value | 0.0054347827 |
| FDR q-value | 0.23728715 |
| FWER p-Value | 0.779 |
| PROBE | DESCRIPTION (from dataset) | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|---|
| 1 | CHUK | 1417091_at 1428210_s_at 1451383_a_at | 2099 | 0.833 | -0.0368 | No | ||
| 2 | MAP3K1 | 1424850_at | 7535 | 0.186 | -0.2716 | No | ||
| 3 | IRAK1 | 1448668_a_at 1460649_at | 8492 | 0.121 | -0.3067 | No | ||
| 4 | TNFRSF1A | 1417291_at | 9678 | 0.046 | -0.3575 | No | ||
| 5 | TLR4 | 1418162_at 1418163_at 1430695_at 1442827_at | 9897 | 0.033 | -0.3651 | No | ||
| 6 | IL1A | 1421473_at | 11680 | -0.080 | -0.4408 | No | ||
| 7 | TRADD | 1429117_at 1439910_a_at 1452622_a_at | 14982 | -0.299 | -0.5703 | No | ||
| 8 | NFKBIA | 1420088_at 1420089_at 1438157_s_at 1448306_at 1449731_s_at | 16399 | -0.411 | -0.6058 | Yes | ||
| 9 | IKBKB | 1426207_at 1426333_a_at 1432275_at 1445141_at 1454184_a_at | 16915 | -0.460 | -0.5967 | Yes | ||
| 10 | FADD | 1416888_at 1446499_at | 17302 | -0.499 | -0.5790 | Yes | ||
| 11 | RIPK1 | 1419508_at 1439273_at 1449485_at | 17429 | -0.514 | -0.5483 | Yes | ||
| 12 | NFKB1 | 1427705_a_at 1442949_at | 18289 | -0.622 | -0.5435 | Yes | ||
| 13 | MYD88 | 1419272_at | 18514 | -0.655 | -0.5073 | Yes | ||
| 14 | RELA | 1419536_a_at | 18597 | -0.667 | -0.4638 | Yes | ||
| 15 | MAP3K7 | 1419988_at 1425795_a_at 1426627_at 1449693_at 1455441_at 1458787_at | 18709 | -0.686 | -0.4203 | Yes | ||
| 16 | TNF | 1419607_at | 19120 | -0.750 | -0.3859 | Yes | ||
| 17 | MAP4K4 | 1422615_at 1440609_at 1448050_s_at 1459912_at | 19860 | -0.898 | -0.3560 | Yes | ||
| 18 | MAP3K7IP1 | 1426898_at 1447692_x_at | 20534 | -1.058 | -0.3118 | Yes | ||
| 19 | TRAF6 | 1421376_at 1421377_at 1435350_at 1443288_at 1446940_at 1446977_at | 20770 | -1.143 | -0.2416 | Yes | ||
| 20 | IKBKG | 1421208_at 1421209_s_at 1435646_at 1435647_at 1450161_at 1454690_at | 20996 | -1.253 | -0.1631 | Yes | ||
| 21 | IL1R1 | 1448950_at 1459777_at | 21838 | -2.908 | 0.0044 | Yes |
